Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)

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Documentation for package ‘DDHFm’ version 1.1.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

cdna	Example cDNA data
cDNAdata	Samples from the cDNA data vector
DDHFm	Data-driven Haar-Fisz for microarrays
ddhft.np.2	Data-Driven Haar-Fisz transformation
ddhft.np.inv	Inverse Data-Driven Haar-Fisz transformation
dhhrcomp	Simulated genes, apply DDHFm then compute and return variance, skewness and kurtosis values
dhhrss	Tabulates variance, skewness and kurtosis coefficients from the output of dhhrcomp
function.from.vector	Function applied for the computation of the Data-Driven Haar-Fisz transform
genesimulator	Gene means simulator
hftrialdatagen	Gene intensities simulator and DDHFm tester
isotone	Performs Isotone regression using "pool-adjacent-violators" algorithm
KURTOSIS	Kurtosis Coefficient estimator
MOMENTS	Moment estimator
ShipCreditFlow	Example Shipping credit flow data
simdurbin	Gene intensities simulator
simdurbin2	Gene intensities simulator
SKEW	Skewness coefficient estimator
which.min.diff	Find index where two vectors are closest