Package: GSEMA
Type: Package
Title: Gene Set Enrichment Meta-Analysis
Version: 0.99.3
Authors@R: c(person("Juan Antonio", "Villatoro-García", role = c("aut", "cre"), email = "juanantoniovillatorogarcia@gmail.com"), person("Pablo", "Jurado-Bascón", role = "aut"), person("Pedro", "Carmona-Sáez", role = "aut"))
Description: Performing the different steps of gene set enrichment meta-analysis. It provides different functions that allow the application of meta-analysis based on the combination of effect sizes from different pathways in different studies to obtain significant pathways that are common to all of them.
License: GPL-2
Depends: R (>= 4.4)
Suggests: BiocStyle, qpdf, BiocGenerics, RUnit, knitr, rmarkdown
Imports: Biobase, limma, Rdpack, singscore, GSVA, progress, pbapply,
        doParallel, parallel, BiocParallel, metafor, RColorBrewer,
        pheatmap, methods, scales, plyr, grDevices, stats, impute
VignetteBuilder: knitr
biocViews: StatisticalMethod, GeneSetEnrichment, Pathways
RdMacros: Rdpack
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.3.2
NeedsCompilation: no
Packaged: 2024-10-09 10:50:23 UTC; juanan
Author: Juan Antonio Villatoro-García [aut, cre],
  Pablo Jurado-Bascón [aut],
  Pedro Carmona-Sáez [aut]
Maintainer: Juan Antonio Villatoro-García <juanantoniovillatorogarcia@gmail.com>
Repository: CRAN
Date/Publication: 2024-10-14 09:20:17 UTC
Built: R 4.5.0; ; 2025-01-29 23:49:43 UTC; unix
