Functions to Interact with the 'FAIR Data Pipeline'


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Documentation for package ‘rDataPipeline’ version 0.60.0

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rDataPipeline-package rDataPipeline
add_read add_read
add_write add_write
create_config create_config
fair_init fair_init
fair_run fair_run
fdp fdp-class
fdp-class fdp-class
finalise Finalise code run
findme findme
find_read_match Find matching read aliases in config file
find_write_match Find matching write aliases in config file
get_components Get H5 file components
get_dataproduct get_dataproduct
get_entry Return all fields associated with a table entry in the data registry
initialise Initialise code run
link_read Link path to external format data
link_write Link path for external format data
raise_issue raise_issue
raise_issue_config Raise issue with config file
raise_issue_repo Raise issue with remote repository
raise_issue_script Raise issue with submission script
random_hash random_hash
rDataPipeline rDataPipeline
read_array Read array component from HDF5 file
read_distribution Read distribution component from TOML file
read_estimate Read estimate component from TOML file
read_table Read table component from HDF5 file
write_array Write array component to HDF5 file
write_distribution Write distribution component to TOML file
write_estimate Write estimate component to TOML file
write_table Write table component to HDF5 file