CRAN Package Check Results for Package Seurat

Last updated on 2024-10-31 17:49:44 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 5.1.0 115.36 614.22 729.58 NOTE
r-devel-linux-x86_64-debian-gcc 5.1.0 79.40 401.40 480.80 NOTE
r-devel-linux-x86_64-fedora-clang 5.1.0 1274.80 OK
r-devel-linux-x86_64-fedora-gcc 5.1.0 1224.19 OK
r-devel-windows-x86_64 5.1.0 110.00 1721.00 1831.00 NOTE
r-patched-linux-x86_64 5.1.0 125.91 570.81 696.72 NOTE
r-release-linux-x86_64 5.1.0 108.24 574.27 682.51 NOTE
r-release-macos-arm64 5.1.0 275.00 NOTE
r-release-macos-x86_64 5.1.0 484.00 NOTE
r-release-windows-x86_64 5.1.0 116.00 1577.00 1693.00 NOTE
r-oldrel-macos-arm64 5.1.0 291.00 NOTE
r-oldrel-macos-x86_64 5.1.0 512.00 NOTE
r-oldrel-windows-x86_64 5.1.0 143.00 0.00 143.00 FAIL

Check Details

Version: 5.1.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: CCAIntegration.Rd: DimReduc FindNeighbors.Rd: Neighbor, Graph, Graphs FindTransferAnchors.Rd: RANN, RcppAnnoy IntegrateData.Rd: DimReduc, RANN, Assay IntegrateEmbeddings.Rd: DimReduc JointPCAIntegration.Rd: DimReduc PrepSCTIntegration.Rd: Assay RPCAIntegration.Rd: DimReduc RunCCA.Rd: merge.Seurat SCTAssay-class.Rd: Assay TopNeighbors.Rd: Neighbor TransferData.Rd: DimReduc, RANN fortify-Spatial.Rd: Segmentation-class, Centroids-class, Molecules-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 5.1.0
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'BPCells', 'presto' Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 5.1.0
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'BPCells', 'monocle', 'presto' Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64

Version: 5.1.0
Check: installed package size
Result: NOTE installed size is 11.2Mb sub-directories of 1Mb or more: R 2.1Mb libs 8.2Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 5.1.0
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'arrow', 'BPCells', 'monocle', 'presto' Flavor: r-oldrel-macos-x86_64

Version: 5.1.0
Check: HTML version of manual
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > ### Aliases: contrast-theory Intensity Luminance > > ### ** Examples > > Intensity(color = c('black', 'white', '#E76BF3')) black white #E76BF3 0.00 255.00 159.58 > > Luminance(color = c('black', 'white', '#E76BF3')) black white #E76BF3 0.0000000 1.0000000 0.3397538 > > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 72.15 1.41 73.77 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-oldrel-windows-x86_64