CRAN Package Check Results for Package deeptime

Last updated on 2024-11-14 06:49:53 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.0 12.95 240.95 253.90 OK
r-devel-linux-x86_64-debian-gcc 2.1.0 9.12 148.45 157.57 ERROR
r-devel-linux-x86_64-fedora-clang 2.1.0 430.15 OK
r-devel-linux-x86_64-fedora-gcc 2.1.0 419.42 OK
r-devel-windows-x86_64 2.1.0 14.00 234.00 248.00 OK
r-patched-linux-x86_64 2.1.0 13.45 222.49 235.94 OK
r-release-linux-x86_64 2.1.0 11.73 224.06 235.79 OK
r-release-macos-arm64 2.1.0 117.00 OK
r-release-macos-x86_64 2.1.0 204.00 OK
r-release-windows-x86_64 2.1.0 15.00 221.00 236.00 OK
r-oldrel-macos-arm64 2.1.0 112.00 OK
r-oldrel-macos-x86_64 2.1.0 192.00 OK
r-oldrel-windows-x86_64 2.1.0 19.00 280.00 299.00 OK

Check Details

Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘coord.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 8 bits/pixel, 251 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5043 bytes Input file size = 5886 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4258 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4206 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4206 Output IDAT size = 4206 bytes (837 bytes decrease) Output file size = 4284 bytes (1602 bytes = 27.22% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_files/figure-html/unnamed-chunk-4-1.png 672x480 pixels, 8 bits/pixel, 251 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4903 bytes Input file size = 5746 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4210 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4183 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4183 Output IDAT size = 4183 bytes (720 bytes decrease) Output file size = 4261 bytes (1485 bytes = 25.84% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_files/figure-html/unnamed-chunk-4-2.png 672x480 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 8784 bytes Input file size = 9654 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7579 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 7540 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 7540 Output IDAT size = 7540 bytes (1244 bytes decrease) Output file size = 7618 bytes (2036 bytes = 21.09% decrease) --- finished re-building ‘coord.Rmd’ --- re-building ‘coord_geo.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-4-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33674 bytes Input file size = 33800 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 30997 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 30997 Output IDAT size = 30997 bytes (2677 bytes decrease) Output file size = 31075 bytes (2725 bytes = 8.06% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 35870 bytes Input file size = 35996 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34647 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 33149 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 33149 Output IDAT size = 33149 bytes (2721 bytes decrease) Output file size = 33227 bytes (2769 bytes = 7.69% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 32568 bytes Input file size = 32682 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27806 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27806 Output IDAT size = 27806 bytes (4762 bytes decrease) Output file size = 27884 bytes (4798 bytes = 14.68% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37477 bytes Input file size = 37603 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31592 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31592 Output IDAT size = 31592 bytes (5885 bytes decrease) Output file size = 31670 bytes (5933 bytes = 15.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-10-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 41169 bytes Input file size = 41307 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39050 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 38131 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 38131 Output IDAT size = 38131 bytes (3038 bytes decrease) Output file size = 38209 bytes (3098 bytes = 7.50% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14978 bytes Input file size = 15068 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14009 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 13539 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 13539 Output IDAT size = 13539 bytes (1439 bytes decrease) Output file size = 13617 bytes (1451 bytes = 9.63% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/coord_geo_files/figure-html/unnamed-chunk-12-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17403 bytes Input file size = 17505 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15810 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15810 Output IDAT size = 15810 bytes (1593 bytes decrease) Output file size = 15888 bytes (1617 bytes = 9.24% decrease) --- finished re-building ‘coord_geo.Rmd’ --- re-building ‘geo.Rmd’ using rmarkdown Quitting from lines 40-45 [unnamed-chunk-4] (geo.Rmd) Error: processing vignette 'geo.Rmd' failed with diagnostics: Timeout was reached [macrostrat.org]: Failed to connect to macrostrat.org port 443 after 10002 ms: Timeout was reached --- failed re-building ‘geo.Rmd’ --- re-building ‘ggarrange2.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/ggarrange2_files/figure-html/unnamed-chunk-2-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 22206 bytes Input file size = 22308 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17464 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17464 Output IDAT size = 17464 bytes (4742 bytes decrease) Output file size = 17542 bytes (4766 bytes = 21.36% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/ggarrange2_files/figure-html/unnamed-chunk-4-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 56063 bytes Input file size = 56213 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44644 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44644 Output IDAT size = 44644 bytes (11419 bytes decrease) Output file size = 44722 bytes (11491 bytes = 20.44% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/ggarrange2_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 59070 bytes Input file size = 59232 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46951 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46951 Output IDAT size = 46951 bytes (12119 bytes decrease) Output file size = 47029 bytes (12203 bytes = 20.60% decrease) --- finished re-building ‘ggarrange2.Rmd’ --- re-building ‘phylogenies.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/phylogenies_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 12816 bytes Input file size = 12906 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10282 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10282 Output IDAT size = 10282 bytes (2534 bytes decrease) Output file size = 10360 bytes (2546 bytes = 19.73% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/phylogenies_files/figure-html/unnamed-chunk-4-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17361 bytes Input file size = 17463 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13739 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13739 Output IDAT size = 13739 bytes (3622 bytes decrease) Output file size = 13817 bytes (3646 bytes = 20.88% decrease) --- finished re-building ‘phylogenies.Rmd’ --- re-building ‘time.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 10136 bytes Input file size = 11006 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9255 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9255 Output IDAT size = 9255 bytes (881 bytes decrease) Output file size = 9333 bytes (1673 bytes = 15.20% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-4-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 32974 bytes Input file size = 33100 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26286 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26286 Output IDAT size = 26286 bytes (6688 bytes decrease) Output file size = 26364 bytes (6736 bytes = 20.35% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-6-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 36440 bytes Input file size = 36566 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28871 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28871 Output IDAT size = 28871 bytes (7569 bytes decrease) Output file size = 28949 bytes (7617 bytes = 20.83% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-7-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37095 bytes Input file size = 37221 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29080 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29080 Output IDAT size = 29080 bytes (8015 bytes decrease) Output file size = 29158 bytes (8063 bytes = 21.66% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-8-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37680 bytes Input file size = 37806 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29609 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29609 Output IDAT size = 29609 bytes (8071 bytes decrease) Output file size = 29687 bytes (8119 bytes = 21.48% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-9-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37951 bytes Input file size = 38077 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29831 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29831 Output IDAT size = 29831 bytes (8120 bytes decrease) Output file size = 29909 bytes (8168 bytes = 21.45% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/time_files/figure-html/unnamed-chunk-11-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16794 bytes Input file size = 16896 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14602 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14602 Output IDAT size = 14602 bytes (2192 bytes decrease) Output file size = 14680 bytes (2216 bytes = 13.12% decrease) --- finished re-building ‘time.Rmd’ --- re-building ‘traits.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/traits_files/figure-html/unnamed-chunk-3-1.png 672x480 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 20583 bytes Input file size = 21465 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19407 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19407 Output IDAT size = 19407 bytes (1176 bytes decrease) Output file size = 19485 bytes (1980 bytes = 9.22% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/traits_files/figure-html/unnamed-chunk-4-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26022 bytes Input file size = 26136 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18308 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18308 Output IDAT size = 18308 bytes (7714 bytes decrease) Output file size = 18386 bytes (7750 bytes = 29.65% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deeptime.Rcheck/vign_test/deeptime/vignettes/traits_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 18798 bytes Input file size = 19680 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17632 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 17614 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17600 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17600 Output IDAT size = 17600 bytes (1198 bytes decrease) Output file size = 17678 bytes (2002 bytes = 10.17% decrease) --- finished re-building ‘traits.Rmd’ SUMMARY: processing the following file failed: ‘geo.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc