Last updated on 2025-11-14 19:49:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.86 | 248.50 | 260.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.39 | 287.72 | 298.11 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 270.07 | 284.27 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 163.00 | 174.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 196.00 | 207.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 235.00 | 259.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.675, system: 0.078, elapsed: 2.662 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.655, system: 0.178, elapsed: 13.893 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.017, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.018, system: 0.251, elapsed: 5.719 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.008, elapsed: 0.213 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.268, system: 0.563, elapsed: 23.674 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.049, elapsed: 1.914 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.435, system: 0.163, elapsed: 11.727 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.211 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.159, elapsed: 4.276 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.005, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.636, system: 0.415, elapsed: 19.051 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.043, elapsed: 2.281 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.706, system: 0.194, elapsed: 13.396 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.019, elapsed: 0.350 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.263, system: 0.328, elapsed: 6.826 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.019, elapsed: 0.328 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.225, system: 0.267, elapsed: 1.043 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.886, system: 0.910, elapsed: 25.150 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.696, system: 0.079, elapsed: 2.065 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.524, system: 0.283, elapsed: 11.014 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.017, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.095, system: 0.269, elapsed: 5.526 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.282 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.933, system: 0.524, elapsed: 18.187 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.307, system: 1.212, elapsed: 38.295 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/136s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.074, elapsed: 2.483 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.860, system: 0.332, elapsed: 14.210 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.020, elapsed: 0.319 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.899, system: 0.297, elapsed: 5.640 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.013, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.437, system: 0.774, elapsed: 23.690 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.833, system: 0.087, elapsed: 2.290 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.768, system: 0.245, elapsed: 15.441 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.463 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.886, system: 0.205, elapsed: 8.072 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.420 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.406, system: 0.596, elapsed: 27.511 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.040, elapsed: 3.159 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.544, system: 0.123, elapsed: 18.235 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.402 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.737, system: 0.181, elapsed: 6.733 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.007, elapsed: 0.313 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.107, system: 0.266, elapsed: 1.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.085, system: 0.663, elapsed: 31.410 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.583, system: 0.035, elapsed: 2.488 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.667, system: 0.073, elapsed: 17.358 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.689, system: 0.176, elapsed: 5.771 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.232 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.737, system: 0.469, elapsed: 17.186 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.672, system: 0.790, elapsed: 44.400 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64