Last updated on 2025-08-26 06:50:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.34 | 254.04 | 267.38 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.45 | 242.23 | 252.68 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.94 | 308.60 | 323.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.85 | 267.10 | 280.95 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 173.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 202.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.056, elapsed: 2.087 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.123, system: 0.203, elapsed: 12.740 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.858, system: 0.242, elapsed: 5.756 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.241 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.477, system: 0.557, elapsed: 22.102 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.053, elapsed: 1.917 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.095, system: 0.193, elapsed: 12.737 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.013, elapsed: 0.236 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.752, system: 0.212, elapsed: 5.540 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.219 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.274, system: 0.497, elapsed: 21.428 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.686, system: 0.063, elapsed: 2.911 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.174, system: 0.102, elapsed: 13.353 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.011, elapsed: 0.264 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.759, system: 0.201, elapsed: 6.886 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.008, elapsed: 0.296 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.210, system: 0.243, elapsed: 1.313 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.834, system: 0.654, elapsed: 26.088 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.648, system: 0.075, elapsed: 2.615 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.101, system: 0.131, elapsed: 15.291 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.829, system: 0.181, elapsed: 6.763 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.278 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.466, system: 0.456, elapsed: 16.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.049, system: 0.897, elapsed: 42.598 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/137s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.664, system: 0.054, elapsed: 2.801 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.221, system: 0.116, elapsed: 16.618 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.015, elapsed: 0.547 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.760, system: 0.198, elapsed: 10.738 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.385 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.542, system: 0.409, elapsed: 32.136 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.031, elapsed: 3.728 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.296, system: 0.086, elapsed: 20.443 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.465 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.682, system: 0.157, elapsed: 5.800 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.325 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.384, system: 0.313, elapsed: 32.193 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.032, elapsed: 2.235 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.187, system: 0.098, elapsed: 14.269 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.241 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.566, system: 0.163, elapsed: 4.868 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.016, elapsed: 0.270 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.054, system: 0.232, elapsed: 0.875 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.326, system: 0.582, elapsed: 23.728 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.454, system: 0.029, elapsed: 2.313 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.378, system: 0.189, elapsed: 16.517 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.634, system: 0.203, elapsed: 6.191 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.383 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.298, system: 0.471, elapsed: 15.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.761, system: 0.946, elapsed: 42.003 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64