Performing the different steps of gene set enrichment meta-analysis. It provides different functions that allow the application of meta-analysis based on the combination of effect sizes from different pathways in different studies to obtain significant pathways that are common to all of them.
| Version: |
0.99.3 |
| Depends: |
R (≥ 4.4) |
| Imports: |
Biobase, limma, Rdpack, singscore, GSVA, progress, pbapply, doParallel, parallel, BiocParallel, metafor, RColorBrewer, pheatmap, methods, scales, plyr, grDevices, stats, impute |
| Suggests: |
BiocStyle, qpdf, BiocGenerics, RUnit, knitr, rmarkdown |
| Published: |
2024-10-14 |
| DOI: |
10.32614/CRAN.package.GSEMA |
| Author: |
Juan Antonio Villatoro-García [aut, cre],
Pablo Jurado-Bascón [aut],
Pedro Carmona-Sáez [aut] |
| Maintainer: |
Juan Antonio Villatoro-García <juanantoniovillatorogarcia at gmail.com> |
| License: |
GPL-2 |
| NeedsCompilation: |
no |
| Materials: |
NEWS |
| In views: |
MetaAnalysis |
| CRAN checks: |
GSEMA results |