Last updated on 2026-10-31 13:51:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.2 | 5.78 | 237.91 | 243.69 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.2 | 3.91 | 155.21 | 159.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.2 | 159.21 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.2 | 5.00 | 158.85 | 163.85 | OK | |
| r-devel-windows-x86_64 | 2.0.2 | 10.00 | 196.00 | 206.00 | OK | |
| r-patched-linux-x86_64 | 2.0.2 | 6.77 | 211.60 | 218.37 | OK | |
| r-release-linux-x86_64 | 2.0.2 | 6.65 | 210.46 | 217.11 | OK | |
| r-release-macos-arm64 | 2.0.2 | 2.00 | 43.00 | 45.00 | OK | |
| r-release-macos-x86_64 | 2.0.2 | 5.00 | 264.00 | 269.00 | OK | |
| r-release-windows-x86_64 | 2.0.2 | 9.00 | 185.00 | 194.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.2 | 2.00 | 55.00 | 57.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.0.2 | 5.00 | 275.00 | 280.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.2 | 11.00 | 235.00 | 246.00 | OK |
Version: 2.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [50s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.7-3
lavaan is FREE software! Please report any bugs.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
*** caught segfault ***
38: address 0x110, cause 'invalid permissions'
test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
Traceback:
1: 59: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)test_files(test_dir = path, test_paths = test_paths, test_package = package,
reporter = reporter, load_helpers = load_helpers, env = env, 2: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, load_package = load_package, parallel = parallel, shuffle = shuffle) fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure,
slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, 60: unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], test_dir("testthat", package = package, reporter = reporter, sampling_weights_type = swt_type)
..., load_package = "installed") 3:
lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, 61: wls_v = wls_v, nacov = nacov)test_check("FCO")
4: An irrecoverable exception occurred. R is aborting now ...
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) {
*** caught segfault ***
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, address 0x110, cause 'invalid permissions'
free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
Traceback:
1:
lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
59: 2: test_files(test_dir = path, test_paths = test_paths, test_package = package, lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, reporter = reporter, load_helpers = load_helpers, env = env, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], load_package = load_package, parallel = parallel, shuffle = shuffle) sampling_weights_type = swt_type)
3: 60: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, test_dir("testthat", package = package, reporter = reporter, wls_v = wls_v, nacov = nacov) ..., load_package = "installed")
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, 61: lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, test_check("FCO") sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs,
ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)An irrecoverable exception occurred. R is aborting now ...
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)
Traceback:
prefix <- paste("Error in", dcall, ": ") 1: LONG <- 75Llav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
2: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, if (is.na(w)) fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, type = "b") unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], if (w > LONG) sampling_weights_type = swt_type) prefix <- paste0(prefix, "\n ")
} 3: else prefix <- "Error : "lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, msg <- paste0(prefix, conditionMessage(e), "\n") wls_v = wls_v, nacov = nacov) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) { 4: cat(msg, file = outFile)lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, .Internal(printDeferredWarnings()) lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, } sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) invisible(structure(msg, class = "try-error", condition = e))
5: })lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE,
13: std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
6:
eval(sc, parent.frame())14:
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, 7: free1 = free1, free2 = free2, s = s, k = k, nf = nf)eval(sc, parent.frame())
8: 15: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, FUN(X[[i]], ...) std.lv = TRUE, warn = FALSE)
16: 9: lapply(X = S, FUN = FUN, ...)doTryCatch(return(expr), name, parentenv, handler)
17: 10: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: 18: tryCatchList(expr, classes, parentenv, handlers)tryCatchOne(expr, names, parentenv, handlers[[1L]])
12: 19: tryCatch(expr, error = function(e) {tryCatchList(expr, classes, parentenv, handlers) call <- conditionCall(e)
if (!is.null(call)) {20: if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L)tryCatch(expr, error = function(e) { dcall <- deparse(call, nlines = 1L) call <- conditionCall(e) prefix <- paste("Error in", dcall, ": ") LONG <- 75L if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) sm <- strsplit(conditionMessage(e), "\n")[[1L]] call <- sys.call(-4L) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) dcall <- deparse(call, nlines = 1L) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") prefix <- paste("Error in", dcall, ": ") if (w > LONG) LONG <- 75L prefix <- paste0(prefix, "\n ") sm <- strsplit(conditionMessage(e), "\n")[[1L]] } else prefix <- "Error : " w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") msg <- paste0(prefix, conditionMessage(e), "\n") if (is.na(w)) .Internal(seterrmessage(msg[1L])) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (!silent && isTRUE(getOption("show.error.messages"))) { type = "b") cat(msg, file = outFile) .Internal(printDeferredWarnings()) if (w > LONG) } prefix <- paste0(prefix, "\n ") invisible(structure(msg, class = "try-error", condition = e))})
}13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") std.lv = TRUE, warn = FALSE), silent = TRUE)
.Internal(seterrmessage(msg[1L]))14: if (!silent && isTRUE(getOption("show.error.messages"))) {generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, cat(msg, file = outFile) free1 = free1, free2 = free2, s = s, k = k, nf = nf) .Internal(printDeferredWarnings())
15: }FUN(X[[i]], ...) invisible(structure(msg, class = "try-error", condition = e))
})16:
lapply(X = S, FUN = FUN, ...)21:
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)17:
doTryCatch(return(expr), name, parentenv, handler)22:
sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])23:
FUN(X[[i]], ...)19: tryCatchList(expr, classes, parentenv, handlers)
24: 20: lapply(seq_len(cores), inner.do)tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 25: call <- sys.call(-4L)parallel::mclapply(1:rep, function(r) { dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, LONG <- 75L free1 = free1, free2 = free2, s = s, k = k, nf = nf) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")}, mc.cores = cores) if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b")26: if (w > LONG) prefix <- paste0(prefix, "\n ")gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) }
else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")27: eval(code, test_env) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) {28: cat(msg, file = outFile)eval(code, test_env) .Internal(printDeferredWarnings())
29: }withCallingHandlers({ invisible(structure(msg, class = "try-error", condition = e)) eval(code, test_env)})
new_expectations <- the$test_expectations > starting_expectations21: if (snapshot_skipped) {try(lapply(X = S, FUN = FUN, ...), silent = TRUE) skip("On CRAN")
}22: else if (!new_expectations && skip_on_empty) {sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) skip_empty()
23: }FUN(X[[i]], ...)
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {24: skip(paste0("{", e$package, "} is not installed."))lapply(seq_len(cores), inner.do) }
}, snapshot_on_cran = function(cnd) {25: parallel::mclapply(1:rep, function(r) { snapshot_skipped <<- TRUE generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, invokeRestart("muffle_cran_snapshot") free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, skip = handle_skip, warning = handle_warning, message = handle_message, }, mc.cores = cores) error = handle_error, interrupt = handle_interrupt)
26:
gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
30: 27: doTryCatch(return(expr), name, parentenv, handler)eval(code, test_env)
31: 28: tryCatchOne(expr, names, parentenv, handlers[[1L]])eval(code, test_env)
29: 32: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationstryCatchList(expr, classes, parentenv, handlers) if (snapshot_skipped) {
skip("On CRAN") }33: else if (!new_expectations && skip_on_empty) {tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { if (snapshot_skipped) { skip(paste0("{", e$package, "} is not installed.")) skip("On CRAN") }}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot") skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {30: doTryCatch(return(expr), name, parentenv, handler) skip(paste0("{", e$package, "} is not installed."))
}31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
}, snapshot_on_cran = function(cnd) {32: tryCatchList(expr, classes, parentenv, handlers) snapshot_skipped <<- TRUE
33: invokeRestart("muffle_cran_snapshot")tryCatch(withCallingHandlers({}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations34: if (snapshot_skipped) {doWithOneRestart(return(expr), restart) skip("On CRAN")
} else if (!new_expectations && skip_on_empty) {35: skip_empty()withOneRestart(expr, restarts[[1L]]) }
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {36: skip(paste0("{", e$package, "} is not installed."))withRestarts(tryCatch(withCallingHandlers({ } eval(code, test_env)}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE new_expectations <- the$test_expectations > starting_expectations invokeRestart("muffle_cran_snapshot") if (snapshot_skipped) {}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
skip("On CRAN")34: doWithOneRestart(return(expr), restart) }
else if (!new_expectations && skip_on_empty) {35: skip_empty()withOneRestart(expr, restarts[[1L]]) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {36: if (on_cran()) {withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, snapshot_on_cran = function(cnd) { skip("On CRAN") } snapshot_skipped <<- TRUE else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot") skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { }) skip(paste0("{", e$package, "} is not installed."))
}37: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUEtest_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new()) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
38: end_test = function() {source_file(path, env = env(env), desc = desc, shuffle = shuffle, }) error_call = error_call)
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% 39: StopReporter$new())FUN(X[[i]], ...)
38: 40: source_file(path, env = env(env), desc = desc, shuffle = shuffle, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call) error_call = error_call)
39: 41: FUN(X[[i]], ...)doTryCatch(return(expr), name, parentenv, handler)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, 42: error_call = error_call)tryCatchOne(expr, names, parentenv, handlers[[1L]])
41: 43: doTryCatch(return(expr), name, parentenv, handler)tryCatchList(expr, classes, parentenv, handlers)
42: 44: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatch(code, testthat_abort_reporter = function(cnd) {
cat(conditionMessage(cnd), "\n")43: NULLtryCatchList(expr, classes, parentenv, handlers)})
44: 45: tryCatch(code, testthat_abort_reporter = function(cnd) {with_reporter(reporters$multi, lapply(test_paths, test_one_file, cat(conditionMessage(cnd), "\n") env = env, desc = desc, shuffle = shuffle, error_call = error_call)) NULL
46: })test_files_serial(test_dir = test_dir, test_package = test_package,
test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, 45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, env = env, desc = desc, shuffle = shuffle, error_call = error_call)) desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: 47: test_files_serial(test_dir = test_dir, test_package = test_package, test_files(test_dir = path, test_paths = test_paths, test_package = package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, reporter = reporter, load_helpers = load_helpers, env = env, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, load_package = load_package, parallel = parallel, shuffle = shuffle) error_call = error_call)
48: 47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")test_files(test_dir = path, test_paths = test_paths, test_package = package,
reporter = reporter, load_helpers = load_helpers, env = env, 49: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, test_check("FCO") load_package = load_package, parallel = parallel, shuffle = shuffle)
An irrecoverable exception occurred. R is aborting now ...
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47:
Traceback:
test_files(test_dir = path, test_paths = test_paths, test_package = package, 1: reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) load_package = load_package, parallel = parallel, shuffle = shuffle)
2: 48: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, test_dir("testthat", package = package, reporter = reporter, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, ..., load_package = "installed") slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 49: sampling_weights_type = swt_type)test_check("FCO")
3: An irrecoverable exception occurred. R is aborting now ...
lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12:
Traceback:
1: tryCatch(expr, error = function(e) {lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) call <- conditionCall(e)
if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) 2: dcall <- deparse(call, nlines = 1L)lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, prefix <- paste("Error in", dcall, ": ") fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, LONG <- 75L unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") sampling_weights_type = swt_type) if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 3: type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") }lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") wls_v = wls_v, nacov = nacov) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) 4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, .Internal(printDeferredWarnings()) lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, } sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, invisible(structure(msg, class = "try-error", condition = e)) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)})
13: 5: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
14: 6: eval(sc, parent.frame())generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: 7: FUN(X[[i]], ...)
eval(sc, parent.frame())16:
lapply(X = S, FUN = FUN, ...) 8:
lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 17: std.lv = TRUE, warn = FALSE)doTryCatch(return(expr), name, parentenv, handler)
9: 18: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: 19: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchList(expr, classes, parentenv, handlers)
11: 20: tryCatchList(expr, classes, parentenv, handlers)tryCatch(expr, error = function(e) {
call <- conditionCall(e)12: if (!is.null(call)) {tryCatch(expr, error = function(e) { call <- conditionCall(e) if (identical(call[[1L]], quote(doTryCatch))) if (!is.null(call)) { call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) if (identical(call[[1L]], quote(doTryCatch))) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] call <- sys.call(-4L) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") dcall <- deparse(call, nlines = 1L) if (is.na(w)) prefix <- paste("Error in", dcall, ": ") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], LONG <- 75L type = "b") sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (w > LONG) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") prefix <- paste0(prefix, "\n ") if (is.na(w)) } w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], else prefix <- "Error : " type = "b") msg <- paste0(prefix, conditionMessage(e), "\n") if (w > LONG) .Internal(seterrmessage(msg[1L])) prefix <- paste0(prefix, "\n ") if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) } .Internal(printDeferredWarnings()) } else prefix <- "Error : " invisible(structure(msg, class = "try-error", condition = e))}) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {21: cat(msg, file = outFile)try(lapply(X = S, FUN = FUN, ...), silent = TRUE) .Internal(printDeferredWarnings())
}22: invisible(structure(msg, class = "try-error", condition = e))sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))})
23: 13: FUN(X[[i]], ...)
24: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)lapply(seq_len(cores), inner.do)
25: 14: parallel::mclapply(1:rep, function(r) {generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores) free1 = free1, free2 = free2, s = s, k = k, nf = nf)
26: 15: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", FUN(X[[i]], ...) "F5"), dv.cutoff = 0.9)
27: 16: eval(code, test_env)lapply(X = S, FUN = FUN, ...)
28: 17: eval(code, test_env)
doTryCatch(return(expr), name, parentenv, handler)29:
withCallingHandlers({18: tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations19: if (snapshot_skipped) {tryCatchList(expr, classes, parentenv, handlers) skip("On CRAN") }
else if (!new_expectations && skip_on_empty) { skip_empty()20: }tryCatch(expr, error = function(e) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { call <- conditionCall(e) skip(paste0("{", e$package, "} is not installed.")) if (!is.null(call)) { } if (identical(call[[1L]], quote(doTryCatch))) }, snapshot_on_cran = function(cnd) { call <- sys.call(-4L) snapshot_skipped <<- TRUE dcall <- deparse(call, nlines = 1L) invokeRestart("muffle_cran_snapshot") prefix <- paste("Error in", dcall, ": ")}, skip = handle_skip, warning = handle_warning, message = handle_message, LONG <- 75L error = handle_error, interrupt = handle_interrupt) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) 30: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], doTryCatch(return(expr), name, parentenv, handler) type = "b")
if (w > LONG) prefix <- paste0(prefix, "\n ")31: tryCatchOne(expr, names, parentenv, handlers[[1L]]) } else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)32: .Internal(printDeferredWarnings()) }tryCatchList(expr, classes, parentenv, handlers) invisible(structure(msg, class = "try-error", condition = e))
33: })
tryCatch(withCallingHandlers({21: eval(code, test_env)try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
new_expectations <- the$test_expectations > starting_expectations22: if (snapshot_skipped) { skip("On CRAN")sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) }
23: else if (!new_expectations && skip_on_empty) {FUN(X[[i]], ...) skip_empty()
24: }lapply(seq_len(cores), inner.do)
}, expectation = handle_expectation, packageNotFoundError = function(e) {25: if (on_cran()) {parallel::mclapply(1:rep, function(r) { skip(paste0("{", e$package, "} is not installed.")) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf) }}, mc.cores = cores)
}, snapshot_on_cran = function(cnd) {26: snapshot_skipped <<- TRUEgen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", invokeRestart("muffle_cran_snapshot") "F5"), dv.cutoff = 0.9)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)27:
34: eval(code, test_env)doWithOneRestart(return(expr), restart)
28: 35: eval(code, test_env)withOneRestart(expr, restarts[[1L]])
29:
withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations36: if (snapshot_skipped) { skip("On CRAN")withRestarts(tryCatch(withCallingHandlers({ } eval(code, test_env) else if (!new_expectations && skip_on_empty) { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip_empty() skip("On CRAN") }}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) { else if (!new_expectations && skip_on_empty) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { skip_empty() snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt)
}, expectation = handle_expectation, packageNotFoundError = function(e) {30: doTryCatch(return(expr), name, parentenv, handler) if (on_cran()) {
31: skip(paste0("{", e$package, "} is not installed.")) }tryCatchOne(expr, names, parentenv, handlers[[1L]])}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE32: invokeRestart("muffle_cran_snapshot")tryCatchList(expr, classes, parentenv, handlers)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal), 33: tryCatch(withCallingHandlers({ end_test = function() { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations }) if (snapshot_skipped) { skip("On CRAN")
} else if (!new_expectations && skip_on_empty) {37: skip_empty() }test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
}, expectation = handle_expectation, packageNotFoundError = function(e) {38: if (on_cran()) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, skip(paste0("{", e$package, "} is not installed.")) error_call = error_call) }}, snapshot_on_cran = function(cnd) {
39: snapshot_skipped <<- TRUEFUN(X[[i]], ...) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) error_call = error_call)
41: 34: doTryCatch(return(expr), name, parentenv, handler)doWithOneRestart(return(expr), restart)
42:
tryCatchOne(expr, names, parentenv, handlers[[1L]])35:
withOneRestart(expr, restarts[[1L]])43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) {36: withRestarts(tryCatch(withCallingHandlers({ cat(conditionMessage(cnd), "\n") NULL eval(code, test_env)}) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, skip("On CRAN") } else if (!new_expectations && skip_on_empty) { env = env, desc = desc, shuffle = shuffle, error_call = error_call))
skip_empty() }46: }, expectation = handle_expectation, packageNotFoundError = function(e) {test_files_serial(test_dir = test_dir, test_package = test_package, if (on_cran()) { test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, skip(paste0("{", e$package, "} is not installed.")) env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, }}, snapshot_on_cran = function(cnd) { desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 47: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, end_test = function() { stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, }) load_package = load_package, parallel = parallel, shuffle = shuffle)
37: 48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")test_code(code = exprs, env = env, reporter = get_reporter() %||%
49: test_check("FCO") StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)An irrecoverable exception occurred. R is aborting now ...
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
*** caught segfault ***
if (snapshot_skipped) {address 0x110, cause 'invalid permissions'
skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64