Last updated on 2025-05-19 19:50:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.0.3 | 11.41 | 945.77 | 957.18 | OK | |
| r-devel-linux-x86_64-debian-gcc | 3.0.3 | 7.80 | 749.24 | 757.04 | OK | |
| r-devel-linux-x86_64-fedora-clang | 3.0.3 | 1491.73 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 3.0.3 | 1546.97 | ERROR | |||
| r-devel-windows-x86_64 | 3.0.3 | 14.00 | 671.00 | 685.00 | OK | |
| r-patched-linux-x86_64 | 3.0.3 | 12.36 | 886.29 | 898.65 | OK | |
| r-release-linux-x86_64 | 3.0.3 | 10.28 | 897.06 | 907.34 | OK | |
| r-release-macos-arm64 | 3.0.3 | 202.00 | OK | |||
| r-release-macos-x86_64 | 3.0.3 | 411.00 | OK | |||
| r-release-windows-x86_64 | 3.0.3 | 12.00 | 676.00 | 688.00 | OK | |
| r-oldrel-macos-arm64 | 3.0.3 | 280.00 | OK | |||
| r-oldrel-macos-x86_64 | 3.0.3 | 438.00 | OK | |||
| r-oldrel-windows-x86_64 | 3.0.3 | 17.00 | 864.00 | 881.00 | OK |
Version: 3.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [22m/18m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(TreatmentPatterns)
>
> test_check("TreatmentPatterns")
Starting 2 test processes
[ FAIL 1 | WARN 6 | SKIP 60 | PASS 170 ]
══ Skipped tests (60) ══════════════════════════════════════════════════════════
• Eunomia [2.0.0] bug (8): 'test-CDMInterfaceDBC.R:6:3',
'test-CDMInterfaceDBC.R:24:3', 'test-CDMInterfaceDBC.R:53:3',
'test-CDMInterfaceDBC.R:80:3', 'test-CDMInterfaceDBC.R:117:3',
'test-multipleCohortTables.R:68:3', 'test-computePathways.R:8:3',
'test-computePathways.R:53:3'
• On CRAN (45): 'test-CDMInterface.R:7:3', 'test-export.R:314:3',
'test-export.R:381:3', 'test-export.R:428:3', 'test-export.R:470:3',
'test-export.R:514:3', 'test-export.R:589:3', 'test-export.R:657:3',
'test-export.R:685:3', 'test-pathwaysLogical.R:8:3',
'test-pathwaysLogical.R:50:3', 'test-pathwaysLogical.R:94:3',
'test-pathwaysLogical.R:138:3', 'test-pathwaysLogical.R:182:3',
'test-pathwaysLogical.R:225:3', 'test-pathwaysLogical.R:270:3',
'test-pathwaysLogical.R:315:3', 'test-pathwaysLogical.R:359:3',
'test-pathwaysLogical.R:403:3', 'test-pathwaysLogical.R:447:3',
'test-pathwaysLogical.R:491:3', 'test-pathwaysLogical.R:535:3',
'test-pathwaysLogical.R:579:3', 'test-pathwaysLogical.R:624:3',
'test-pathwaysLogical.R:669:3', 'test-pathwaysLogical.R:712:3',
'test-pathwaysLogical.R:755:3', 'test-pathwaysLogical.R:800:3',
'test-pathwaysLogical.R:845:3', 'test-pathwaysLogical.R:886:3',
'test-pathwaysLogical.R:929:3', 'test-pathwaysLogical.R:971:3',
'test-pathwaysLogical.R:1013:3', 'test-pathwaysLogical.R:1055:3',
'test-pathwaysLogical.R:1098:3', 'test-pathwaysLogical.R:1144:3',
'test-pathwaysLogical.R:1188:3', 'test-pathwaysLogical.R:1232:3',
'test-pathwaysLogical.R:1276:3', 'test-pathwaysLogical.R:1322:3',
'test-pathwaysLogical.R:1369:3', 'test-pathwaysLogical.R:1416:3',
'test-pathwaysLogical.R:1462:3',
'test-pathwaysMultipleTargetsLogical.R:19:3',
'test-pathwaysMultipleTargetsLogical.R:225:3'
• On Linux (7): 'test-executeTreatmentPatterns.R:10:3', 'test-export.R:30:3',
'test-export.R:99:3', 'test-export.R:149:3', 'test-export.R:193:3',
'test-export.R:237:3', 'test-computePathways.R:715:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CDMInterfaceCDMC.R:92:3'): Method: fetchCohortTable ────────────
Error: unable to find an inherited method for function 'dbWriteTable' for signature 'conn = "Andromeda", name = "character", value = "cohort_table"'
Backtrace:
▆
1. └─cdmInterface$fetchCohortTable(...) at test-CDMInterfaceCDMC.R:92:3
2. └─private$cdmconFetchCohortTable(...)
3. ├─methods (local) `$<-`(`*tmp*`, "tbl_temp", value = `<chrt_tbl[,7]>`)
4. └─Andromeda (local) `$<-`(`*tmp*`, "tbl_temp", value = `<chrt_tbl[,7]>`)
5. ├─methods (local) `[[<-`(`*tmp*`, name, value = `<chrt_tbl[,7]>`)
6. └─Andromeda (local) `[[<-`(`*tmp*`, name, value = `<chrt_tbl[,7]>`)
7. └─Andromeda (local) .local(x, i, ..., value)
8. └─duckdb::dbWriteTable(...)
9. └─methods (local) `<fn>`(`<list>`, `<stndrdGn>`, `<env>`)
[ FAIL 1 | WARN 6 | SKIP 60 | PASS 170 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 3.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [23m/30m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(TreatmentPatterns)
>
> test_check("TreatmentPatterns")
Starting 2 test processes
[ FAIL 1 | WARN 6 | SKIP 60 | PASS 170 ]
══ Skipped tests (60) ══════════════════════════════════════════════════════════
• Eunomia [2.0.0] bug (8): 'test-CDMInterfaceDBC.R:6:3',
'test-CDMInterfaceDBC.R:24:3', 'test-CDMInterfaceDBC.R:53:3',
'test-CDMInterfaceDBC.R:80:3', 'test-CDMInterfaceDBC.R:117:3',
'test-multipleCohortTables.R:68:3', 'test-computePathways.R:8:3',
'test-computePathways.R:53:3'
• On CRAN (45): 'test-CDMInterface.R:7:3', 'test-export.R:314:3',
'test-export.R:381:3', 'test-export.R:428:3', 'test-export.R:470:3',
'test-export.R:514:3', 'test-export.R:589:3', 'test-export.R:657:3',
'test-export.R:685:3', 'test-pathwaysLogical.R:8:3',
'test-pathwaysLogical.R:50:3', 'test-pathwaysLogical.R:94:3',
'test-pathwaysLogical.R:138:3', 'test-pathwaysLogical.R:182:3',
'test-pathwaysLogical.R:225:3', 'test-pathwaysLogical.R:270:3',
'test-pathwaysLogical.R:315:3', 'test-pathwaysLogical.R:359:3',
'test-pathwaysLogical.R:403:3', 'test-pathwaysLogical.R:447:3',
'test-pathwaysLogical.R:491:3', 'test-pathwaysLogical.R:535:3',
'test-pathwaysLogical.R:579:3', 'test-pathwaysLogical.R:624:3',
'test-pathwaysLogical.R:669:3', 'test-pathwaysLogical.R:712:3',
'test-pathwaysLogical.R:755:3', 'test-pathwaysLogical.R:800:3',
'test-pathwaysLogical.R:845:3', 'test-pathwaysLogical.R:886:3',
'test-pathwaysLogical.R:929:3', 'test-pathwaysLogical.R:971:3',
'test-pathwaysLogical.R:1013:3', 'test-pathwaysLogical.R:1055:3',
'test-pathwaysLogical.R:1098:3', 'test-pathwaysLogical.R:1144:3',
'test-pathwaysLogical.R:1188:3', 'test-pathwaysLogical.R:1232:3',
'test-pathwaysLogical.R:1276:3', 'test-pathwaysLogical.R:1322:3',
'test-pathwaysLogical.R:1369:3', 'test-pathwaysLogical.R:1416:3',
'test-pathwaysLogical.R:1462:3',
'test-pathwaysMultipleTargetsLogical.R:19:3',
'test-pathwaysMultipleTargetsLogical.R:225:3'
• On Linux (7): 'test-executeTreatmentPatterns.R:10:3', 'test-export.R:30:3',
'test-export.R:99:3', 'test-export.R:149:3', 'test-export.R:193:3',
'test-export.R:237:3', 'test-computePathways.R:715:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CDMInterfaceCDMC.R:92:3'): Method: fetchCohortTable ────────────
Error: unable to find an inherited method for function 'dbWriteTable' for signature 'conn = "Andromeda", name = "character", value = "cohort_table"'
Backtrace:
▆
1. └─cdmInterface$fetchCohortTable(...) at test-CDMInterfaceCDMC.R:92:3
2. └─private$cdmconFetchCohortTable(...)
3. ├─methods (local) `$<-`(`*tmp*`, "tbl_temp", value = `<chrt_tbl[,7]>`)
4. └─Andromeda (local) `$<-`(`*tmp*`, "tbl_temp", value = `<chrt_tbl[,7]>`)
5. ├─methods (local) `[[<-`(`*tmp*`, name, value = `<chrt_tbl[,7]>`)
6. └─Andromeda (local) `[[<-`(`*tmp*`, name, value = `<chrt_tbl[,7]>`)
7. └─Andromeda (local) .local(x, i, ..., value)
8. └─duckdb::dbWriteTable(...)
9. └─methods (local) `<fn>`(`<list>`, `<stndrdGn>`, `<env>`)
[ FAIL 1 | WARN 6 | SKIP 60 | PASS 170 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc