Last updated on 2026-10-24 14:49:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.34 | 18.74 | 149.00 | 167.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.34 | 13.43 | 93.39 | 106.82 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.34 | 15.00 | 97.93 | 112.93 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.34 | 14.00 | 101.12 | 115.12 | OK | |
| r-devel-windows-x86_64 | 0.34 | 23.00 | 169.00 | 192.00 | OK | |
| r-patched-linux-x86_64 | 0.34 | 21.60 | 144.22 | 165.82 | OK | |
| r-release-linux-x86_64 | 0.34 | 19.67 | 144.36 | 164.03 | OK | |
| r-release-macos-arm64 | 0.34 | 5.00 | 35.00 | 40.00 | OK | |
| r-release-macos-x86_64 | 0.34 | 14.00 | 194.00 | 208.00 | OK | |
| r-release-windows-x86_64 | 0.34 | 22.00 | 147.00 | 169.00 | OK | |
| r-oldrel-macos-arm64 | 0.34 | 5.00 | 34.00 | 39.00 | OK | |
| r-oldrel-macos-x86_64 | 0.34 | 14.00 | 129.00 | 143.00 | OK | |
| r-oldrel-windows-x86_64 | 0.34 | 31.00 | 192.00 | 223.00 | OK |
Version: 0.34
Check: examples
Result: ERROR
Running examples in ‘gcomputation-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gc_times
> ### Title: G-Computation to Estimate a Marginal Effect for Time-to-Event
> ### Outcome
> ### Aliases: gc_times
> ### Keywords: G-computation Time-to-event outcome
>
> ### ** Examples
>
> data(dataPROPHYVAP)
>
> .f <- formula(Surv(TIME_DEATH, DEATH) ~ GROUP + AGE +
+ SEX + BMI + DIABETES)
>
> ### In practice use larger values for cv and boot.number
> ### We set boot.number and cv at 10 for speed in CRAN checks
> ### cv=30 and boot.number=1000 are more appropriate values
> gc1 <- gc_times(formula=.f, model="lasso", data=dataPROPHYVAP,
+ group="GROUP", cv=10, boot.type="bcv",
+ boot.number=10, effect="ATE", progress=TRUE , pro.time=20,
+ boot.tune=FALSE)
|
| | 0%Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
Warning: Starting in glmnet 5.1, the default Cox tie-handling method will change from 'breslow' to 'efron' (matching survival::coxph). To silence this message and lock in the v5.0 default, pass cox.ties = 'breslow' explicitly. To preview the v5.1 behavior, pass cox.ties = 'efron'.
|
|===== | 10%Error in a$specials[[i]] : subscript out of bounds
Calls: gc_times ... .gc_times -> predict -> predict.coxph -> delete.response -> off
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc