Last updated on 2026-01-21 19:50:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.61 | 246.07 | 259.68 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.70 | 285.06 | 295.76 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 323.15 | 352.15 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 403.35 | 433.35 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.45 | 276.00 | 291.45 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.99 | 270.09 | 284.08 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 355.00 | 365.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 192.00 | 213.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 358.00 | 368.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 252.00 | 276.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/315s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.662, system: 0.051, elapsed: 2.694 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.495, system: 0.086, elapsed: 12.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.017, elapsed: 0.495 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.569, system: 0.662, elapsed: 37.675 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.177 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.683, system: 0.840, elapsed: 53.944 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.599, system: 0.040, elapsed: 2.117 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.383, system: 0.079, elapsed: 11.245 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.323, system: 0.027, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.069, system: 0.785, elapsed: 69.515 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.482 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.165, system: 0.960, elapsed: 84.378 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.030, elapsed: 3.437 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.677, system: 0.064, elapsed: 16.862 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.322, system: 0.017, elapsed: 1.197 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.955, system: 0.856, elapsed: 113.452 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.189 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.244, system: 0.374, elapsed: 1.028 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.594, system: 1.387, elapsed: 137.263 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.036, elapsed: 1.587 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.634, system: 0.054, elapsed: 11.183 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.013, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.152, system: 0.585, elapsed: 6.788 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.003, elapsed: 0.196 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.038, system: 0.686, elapsed: 12.151 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.448, system: 1.405, elapsed: 33.025 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/237s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.626, system: 0.044, elapsed: 4.433 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.629, system: 0.065, elapsed: 26.121 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.014, elapsed: 0.702 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.308, system: 0.429, elapsed: 12.600 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.005, elapsed: 0.491 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.507, system: 0.582, elapsed: 45.881 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.654, system: 0.035, elapsed: 4.457 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.630, system: 0.074, elapsed: 32.589 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.013, elapsed: 0.631 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.335, system: 0.406, elapsed: 13.516 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.464 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.551, system: 0.549, elapsed: 53.180 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.567, system: 0.028, elapsed: 4.340 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.678, system: 0.077, elapsed: 26.663 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.614 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.418, system: 0.419, elapsed: 12.494 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.004, elapsed: 0.442 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.214, system: 0.323, elapsed: 1.978 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.931, system: 0.890, elapsed: 48.423 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.033, elapsed: 4.224 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.730, system: 0.072, elapsed: 26.307 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.015, elapsed: 0.529 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.319, system: 0.413, elapsed: 12.554 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.467 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.937, system: 0.540, elapsed: 29.457 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.626, system: 1.097, elapsed: 75.334 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64