Last updated on 2026-03-28 17:50:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.30 | 271.50 | 286.80 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.68 | 232.42 | 245.10 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 23.00 | 194.00 | 217.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 12.13 | 329.92 | 342.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.91 | 345.24 | 359.15 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 437.00 | 448.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 195.00 | 217.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 409.00 | 419.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 282.00 | 306.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/396s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.531, system: 0.040, elapsed: 2.837 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.074, elapsed: 14.583 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.018, elapsed: 0.774 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.721, system: 0.694, elapsed: 32.797 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.003, elapsed: 0.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.795, system: 0.855, elapsed: 52.180 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.562, system: 0.030, elapsed: 2.380 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.460, system: 0.074, elapsed: 12.792 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 0.576 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.832, system: 0.691, elapsed: 39.729 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.003, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.825, system: 0.834, elapsed: 56.478 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.602, system: 0.035, elapsed: 2.525 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.637, system: 0.085, elapsed: 12.995 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.016, elapsed: 0.822 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.959, system: 0.843, elapsed: 127.701 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.299 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.300, system: 0.262, elapsed: 1.710 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.592, system: 1.284, elapsed: 147.064 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.491, system: 0.035, elapsed: 2.576 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.629, system: 0.056, elapsed: 16.839 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.018, elapsed: 1.009 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.101, system: 0.818, elapsed: 93.422 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.182 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.858, system: 0.630, elapsed: 17.421 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.181, system: 1.587, elapsed: 132.569 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [97s/368s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.045, elapsed: 2.348 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.622, system: 0.073, elapsed: 11.735 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.018, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.410, system: 0.684, elapsed: 29.854 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.208 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.814, system: 0.851, elapsed: 45.339 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.517, system: 0.030, elapsed: 1.794 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.424, system: 0.068, elapsed: 12.586 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.014, elapsed: 0.918 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.261, system: 0.596, elapsed: 10.156 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.170 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.142, system: 0.729, elapsed: 26.253 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.032, elapsed: 1.877 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.597, system: 0.071, elapsed: 15.473 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.016, elapsed: 0.959 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.722, system: 0.832, elapsed: 131.986 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.292 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.238, system: 0.313, elapsed: 1.557 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.203, system: 1.296, elapsed: 153.044 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.032, elapsed: 3.088 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.065, elapsed: 17.281 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.016, elapsed: 0.768 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.489, system: 0.760, elapsed: 94.707 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.195 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.499, system: 0.630, elapsed: 19.502 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.121, system: 1.535, elapsed: 136.654 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64