Last updated on 2025-12-30 07:50:10 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.06 | 244.27 | 258.33 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 205.61 | 216.14 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 193.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.19 | 283.55 | 298.74 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.00 | 255.84 | 270.84 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 163.00 | 173.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 197.00 | 218.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 303.00 | 314.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 236.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.652, system: 0.050, elapsed: 2.274 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.571, system: 0.138, elapsed: 12.344 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.016, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.381, system: 0.430, elapsed: 5.886 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.542, system: 0.667, elapsed: 21.837 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.049, elapsed: 1.877 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.468, system: 0.121, elapsed: 11.320 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.220 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.607, system: 0.425, elapsed: 8.267 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.419 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.560, system: 0.634, elapsed: 22.837 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.040, elapsed: 3.858 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.695, system: 0.097, elapsed: 20.463 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.014, elapsed: 0.385 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.498, system: 0.421, elapsed: 6.932 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.239 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.227, system: 0.223, elapsed: 1.112 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.093, system: 0.837, elapsed: 34.274 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.602, system: 0.042, elapsed: 2.438 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.488, system: 0.094, elapsed: 11.500 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.014, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.573, system: 0.437, elapsed: 6.660 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.252 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.563, system: 0.535, elapsed: 12.817 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.289, system: 1.149, elapsed: 34.799 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/235s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.792, system: 0.082, elapsed: 2.516 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.992, system: 0.344, elapsed: 14.915 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.023, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.485, system: 0.550, elapsed: 15.351 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.006, elapsed: 0.528 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.231, system: 1.038, elapsed: 34.592 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.650, system: 0.048, elapsed: 4.713 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.660, system: 0.096, elapsed: 27.064 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.015, elapsed: 0.596 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.347, system: 0.405, elapsed: 13.108 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.496 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.594, system: 0.591, elapsed: 47.666 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.035, elapsed: 4.096 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.635, system: 0.073, elapsed: 25.664 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.013, elapsed: 0.559 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.416, system: 0.398, elapsed: 14.349 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.005, elapsed: 0.781 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.193, system: 0.307, elapsed: 2.485 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.878, system: 0.854, elapsed: 49.933 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.658, system: 0.042, elapsed: 5.831 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.682, system: 0.077, elapsed: 27.848 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.017, elapsed: 0.616 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.241, system: 0.416, elapsed: 12.205 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.518 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.830, system: 0.528, elapsed: 40.686 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.467, system: 1.112, elapsed: 89.939 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64