Last updated on 2026-07-07 14:52:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.3 | 2.64 | 62.53 | 65.17 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.3.3 | 1.81 | 45.94 | 47.75 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.3 | 311.37 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.3 | 330.28 | OK | |||
| r-devel-windows-x86_64 | 0.3.3 | 5.00 | 195.00 | 200.00 | OK | |
| r-patched-linux-x86_64 | 0.3.3 | 2.88 | 174.48 | 177.36 | OK | |
| r-release-linux-x86_64 | 0.3.3 | 2.45 | 173.66 | 176.11 | OK | |
| r-release-macos-arm64 | 0.3.3 | 1.00 | 48.00 | 49.00 | OK | |
| r-release-macos-x86_64 | 0.3.3 | 2.00 | 251.00 | 253.00 | OK | |
| r-release-windows-x86_64 | 0.3.3 | 5.00 | 194.00 | 199.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.3 | OK | ||||
| r-oldrel-macos-x86_64 | 0.3.3 | 2.00 | 133.00 | 135.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.3 | 6.00 | 249.00 | 255.00 | OK |
Version: 0.3.3
Check: examples
Result: ERROR
Running examples in ‘multpois-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Anova.mp
> ### Title: ANOVA-style results for a multinomial-Poisson model
> ### Aliases: Anova.mp
>
> ### ** Examples
>
> library(multpois)
>
> ## two between-subjects factors (X1,X2) with polytomous response (Y)
> data(bs3, package="multpois")
>
> bs3$PId = factor(bs3$PId)
> bs3$Y = factor(bs3$Y)
> bs3$X1 = factor(bs3$X1)
> bs3$X2 = factor(bs3$X2)
> contrasts(bs3$X1) <- "contr.sum"
> contrasts(bs3$X2) <- "contr.sum"
>
> m1 = glm.mp(Y ~ X1*X2, data=bs3)
> Anova.mp(m1, type=3)
Analysis of Deviance Table (Type III tests)
Response: Y
via the multinomial-Poisson trick
Chisq Df N Pr(>Chisq)
X1 3.5327 2 60 0.17096
X2 7.8081 2 60 0.02016 *
X1:X2 4.0039 2 60 0.13507
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
>
> ## two within-subjects factors (X1,X2) with polytomous response (Y)
> data(ws3, package="multpois")
>
> ws3$PId = factor(ws3$PId)
> ws3$Y = factor(ws3$Y)
> ws3$X1 = factor(ws3$X1)
> ws3$X2 = factor(ws3$X2)
> contrasts(ws3$X1) <- "contr.sum"
> contrasts(ws3$X2) <- "contr.sum"
>
> m2 = glmer.mp(Y ~ X1*X2 + (1|PId), data=ws3)
Error: Downdated VtV is not positive definite
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.3.3
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [13s/15s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(multpois)
>
> test_check("multpois")
Saving _problems/test-Anova.mp-100.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 68 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-Anova.mp.R:100:7'): type I: match p-values for one-way within-Ss. ──
Expected `abs(a1.pvalue - a2$`Pr(>Chisq)`) <= 0.1` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-Anova.mp.R:93:3
2. │ └─base::withCallingHandlers(...)
3. ├─base::suppressWarnings(...) at test-Anova.mp.R:94:5
4. │ └─base::withCallingHandlers(...)
5. └─testthat::expect_true(abs(a1.pvalue - a2$`Pr(>Chisq)`) <= 0.1) at test-Anova.mp.R:100:7
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 68 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.3.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘multpois.Rmd’ using rmarkdown
Quitting from multpois.Rmd:305-309 [unnamed-chunk-18]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Downdated VtV is not positive definite
---
Backtrace:
▆
1. └─multpois::glmer.mp(Y ~ X1 * X2 + (1 | PId), data = ws3)
2. └─lme4::glmer(formula = f, data = df, family = poisson, ...)
3. └─lme4::optimizeGlmer(...)
4. └─lme4:::optwrap(...)
5. ├─base::withCallingHandlers(...)
6. ├─base::do.call(optfun, arglist)
7. └─lme4 (local) `<fn>`(...)
8. ├─nM$newf(fn(nM$xeval()))
9. │ └─base::stopifnot(length(value <- as.numeric(value)) == 1L)
10. └─lme4 (local) fn(nM$xeval())
11. └─lme4 (local) pwrssUpdate(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'multpois.Rmd' failed with diagnostics:
Downdated VtV is not positive definite
--- failed re-building ‘multpois.Rmd’
SUMMARY: processing the following file failed:
‘multpois.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc