Last updated on 2025-05-19 19:51:00 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.3 | 14.66 | 115.06 | 129.72 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.3.3 | 10.18 | 80.13 | 90.31 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.3.3 | 214.24 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.3 | 205.91 | ERROR | |||
| r-devel-windows-x86_64 | 1.3.3 | 16.00 | 188.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.3.3 | 11.90 | 192.82 | 204.72 | OK | |
| r-release-linux-x86_64 | 1.3.3 | 13.28 | 107.24 | 120.52 | ERROR | |
| r-release-macos-arm64 | 1.3.3 | 96.00 | OK | |||
| r-release-macos-x86_64 | 1.3.3 | 135.00 | OK | |||
| r-release-windows-x86_64 | 1.3.3 | 15.00 | 187.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.3.3 | 86.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.3.3 | 142.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.3.3 | 19.00 | 235.00 | 254.00 | OK |
Version: 1.3.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(viralmodels)
>
> test_check("viralmodels")
-- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 --
v dplyr 1.1.4 v readr 2.1.5
v forcats 1.0.0 v stringr 1.5.1
v ggplot2 3.5.2 v tibble 3.2.1
v lubridate 1.9.4 v tidyr 1.3.1
v purrr 1.0.4
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x readr::edition_get() masks testthat::edition_get()
x dplyr::filter() masks stats::filter()
x purrr::is_null() masks testthat::is_null()
x dplyr::lag() masks stats::lag()
x readr::local_edition() masks testthat::local_edition()
x dplyr::matches() masks tidyr::matches(), testthat::matches()
i Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors
Loading required package: parsnip
Attaching package: 'kernlab'
The following object is masked from 'package:purrr':
cross
The following object is masked from 'package:ggplot2':
alpha
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-viralmodel.R:6:3'): `viralmodel()` works ───────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralmodel.R:6:3
── Error ('test-viralpreds.R:5:3'): viralpreds() works ─────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralpreds.R:5:3
── Error ('test-viraltab.R:6:3'): viraltab() works ─────────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viraltab.R:6:3
── Error ('test-viralvis.R:6:3'): `viralvis()` plots as expected ───────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralvis.R:6:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
Deleting unused snapshots:
• viralvis/viralvis.svg
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.3.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(viralmodels)
>
> test_check("viralmodels")
-- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 --
v dplyr 1.1.4 v readr 2.1.5
v forcats 1.0.0 v stringr 1.5.1
v ggplot2 3.5.2 v tibble 3.2.1
v lubridate 1.9.4 v tidyr 1.3.1
v purrr 1.0.4
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x readr::edition_get() masks testthat::edition_get()
x dplyr::filter() masks stats::filter()
x purrr::is_null() masks testthat::is_null()
x dplyr::lag() masks stats::lag()
x readr::local_edition() masks testthat::local_edition()
x dplyr::matches() masks tidyr::matches(), testthat::matches()
i Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors
Loading required package: parsnip
Attaching package: 'kernlab'
The following object is masked from 'package:purrr':
cross
The following object is masked from 'package:ggplot2':
alpha
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-viralmodel.R:6:3'): `viralmodel()` works ───────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralmodel.R:6:3
── Error ('test-viralpreds.R:5:3'): viralpreds() works ─────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralpreds.R:5:3
── Error ('test-viraltab.R:6:3'): viraltab() works ─────────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viraltab.R:6:3
── Error ('test-viralvis.R:6:3'): `viralvis()` plots as expected ───────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralvis.R:6:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
Deleting unused snapshots:
• viralvis/viralvis.svg
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.3.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(viralmodels)
>
> test_check("viralmodels")
-- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 --
v dplyr 1.1.4 v readr 2.1.5
v forcats 1.0.0 v stringr 1.5.1
v ggplot2 3.5.2 v tibble 3.2.1
v lubridate 1.9.4 v tidyr 1.3.1
v purrr 1.0.4
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x readr::edition_get() masks testthat::edition_get()
x dplyr::filter() masks stats::filter()
x purrr::is_null() masks testthat::is_null()
x dplyr::lag() masks stats::lag()
x readr::local_edition() masks testthat::local_edition()
x dplyr::matches() masks tidyr::matches(), testthat::matches()
i Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors
Loading required package: parsnip
Attaching package: 'kernlab'
The following object is masked from 'package:purrr':
cross
The following object is masked from 'package:ggplot2':
alpha
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-viralmodel.R:6:3'): `viralmodel()` works ───────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralmodel.R:6:3
── Error ('test-viralpreds.R:5:3'): viralpreds() works ─────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralpreds.R:5:3
── Error ('test-viraltab.R:6:3'): viraltab() works ─────────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viraltab.R:6:3
── Error ('test-viralvis.R:6:3'): `viralvis()` plots as expected ───────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralvis.R:6:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
Deleting unused snapshots:
• viralvis/viralvis.svg
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.3.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/42s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(viralmodels)
>
> test_check("viralmodels")
-- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 --
v dplyr 1.1.4 v readr 2.1.5
v forcats 1.0.0 v stringr 1.5.1
v ggplot2 3.5.2 v tibble 3.2.1
v lubridate 1.9.4 v tidyr 1.3.1
v purrr 1.0.4
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x readr::edition_get() masks testthat::edition_get()
x dplyr::filter() masks stats::filter()
x purrr::is_null() masks testthat::is_null()
x dplyr::lag() masks stats::lag()
x readr::local_edition() masks testthat::local_edition()
x dplyr::matches() masks tidyr::matches(), testthat::matches()
i Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors
Loading required package: parsnip
Attaching package: 'kernlab'
The following object is masked from 'package:purrr':
cross
The following object is masked from 'package:ggplot2':
alpha
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-viralmodel.R:6:3'): `viralmodel()` works ───────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralmodel.R:6:3
── Error ('test-viralpreds.R:5:3'): viralpreds() works ─────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralpreds.R:5:3
── Error ('test-viraltab.R:6:3'): viraltab() works ─────────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viraltab.R:6:3
── Error ('test-viralvis.R:6:3'): `viralvis()` plots as expected ───────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralvis.R:6:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
Deleting unused snapshots:
• viralvis/viralvis.svg
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.3.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(viralmodels)
>
> test_check("viralmodels")
-- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 --
v dplyr 1.1.4 v readr 2.1.5
v forcats 1.0.0 v stringr 1.5.1
v ggplot2 3.5.2 v tibble 3.2.1
v lubridate 1.9.4 v tidyr 1.3.1
v purrr 1.0.4
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x readr::edition_get() masks testthat::edition_get()
x dplyr::filter() masks stats::filter()
x purrr::is_null() masks testthat::is_null()
x dplyr::lag() masks stats::lag()
x readr::local_edition() masks testthat::local_edition()
x dplyr::matches() masks tidyr::matches(), testthat::matches()
i Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors
Loading required package: parsnip
Attaching package: 'kernlab'
The following object is masked from 'package:purrr':
cross
The following object is masked from 'package:ggplot2':
alpha
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-viralmodel.R:6:3'): `viralmodel()` works ───────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralmodel.R:6:3
── Error ('test-viralpreds.R:5:3'): viralpreds() works ─────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralpreds.R:5:3
── Error ('test-viraltab.R:6:3'): viraltab() works ─────────────────────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viraltab.R:6:3
── Error ('test-viralvis.R:6:3'): `viralvis()` plots as expected ───────────────
<packageNotFoundError/error/condition>
Error in `library(kknn)`: there is no package called 'kknn'
Backtrace:
▆
1. └─base::library(kknn) at test-viralvis.R:6:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
Deleting unused snapshots:
• viralvis/viralvis.svg
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64