HAPTRACE: Haplotype-Based Tracking of Admixed Population for Breed Composition Estimation

Simulate populations and track haplotypes over generations to evaluate population admixture. The 'HAPTRACE' supports customisable population parameters, including size, number of markers, mutation rates and recombination.

Version: 0.1.1
Imports: data.table, gdata, hsphase (≥ 3.0.1), Rcpp, RcppArmadillo
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, rmarkdown
Published: 2026-07-30
DOI: 10.32614/CRAN.package.HAPTRACE (may not be active yet)
Author: Shweta Sahoo ORCID iD [aut, cre], Sara de las Heras-Saldana ORCID iD [aut], Julius H. J. van der Werf ORCID iD [aut], Mohammad H. Ferdosi ORCID iD [aut]
Maintainer: Shweta Sahoo <queryhap01 at gmail.com>
License: GPL (≥ 3)
NeedsCompilation: yes
CRAN checks: HAPTRACE results

Documentation:

Reference manual: HAPTRACE.html , HAPTRACE.pdf
Vignettes: Introduction to HAPTRACE (source, R code)

Downloads:

Package source: HAPTRACE_0.1.1.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): HAPTRACE_0.1.1.tgz, r-oldrel (arm64): HAPTRACE_0.1.1.tgz, r-release (x86_64): HAPTRACE_0.1.1.tgz, r-oldrel (x86_64): HAPTRACE_0.1.1.tgz

Linking:

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